Publications

Miri Krupkin at pubmed.

Publications

• Advances in understanding the initiation of HIV-1 reverse transcription
  Krupkin M^*, Jackson LN^*, Ha B^*, Puglisi EV.
  Current Opinion in Structural Biology, Volume 65, December 2020, Pages 175-183.
  link.

• Structural insights of lincosamides targeting the ribosome of Staphylococcus aureus
  Matzov D^*, Eyal Z^*, Benhamou RI, Shalev-Benami M, Halfon Y, Krupkin M, Zimmerman E, Rozenberg H, Bashan A, Fridman M, Yonath A.
  Nucleic Acids Res. 2017 Sep 29;45(17):10284-10292.
  link.

• The ribosomal protein uL22 modulates the shape of the protein exit tunnel
  Wekselman I, Zimmerman E, Davidovich C, Belousoff M, Matzov D, Krupkin M, Rozenberg H, Bashan A, Friedlander G, Kjeldgaard J, Ingmer H, Lindahl L, Zengel JM, Yonath A.
  Structure. 2017 Aug 1;25(8):1233-1241.e3. Epub 2017 Jul 6.
  link.

• Avilamycin and evernimicin induce structural changes in rProteins uL16 and CTC that enhance the inhibition of A-site tRNA binding
  Krupkin M^*, Wekselman I^*, Matzov D, Eyal Z, Diskin Posner Y, Rozenberg H, Zimmerman E, Bashan A, Yonath A.
  Proc Natl Acad Sci U S A. 2016 Nov 1;113(44):E6796-E6805.
  link.
  

• A novel pleuromutilin antibacterial compound, its binding mode and selectivity mechanism
  Eyal Z^*, Matzov D^*, Krupkin M, Paukner S, Riedl R, Rozenberg H, Zimmerman E, Bashan A, and Yonath A.
  Sci Rep. 2016 Dec 13;6:39004.
  link.

• Ribosomal antibiotics: Contemporary challenges
  Auerbach-Nevo T, Baram D, Bashan A, Belousoff M, Breiner E, Davidovich C, Cimicata G, Eyal Z, Halfon Y, Krupkin M, … Yonath A.
  Antibiotics (Basel). 2016 Jun 29;5(3). pii: E24.
  link.

• Structural insights into species-specific features of the ribosome from the pathogen staphylococcus aureus
  Eyal Z^*, Matzov D^*, Krupkin M, Wekselman I, Paukner S, Zimmerman E, Rozenberg H, Bashan A, Yonath A.
  Proc Natl Acad Sci U S A. 2015 Oct 27;112(43):E5805-14.
  link.

• A recombinant collagen–mRNA platform for controllable protein synthesis
  Sun L, Xiong Y, Bashan A, Zimmerman E, Shulman Daube S, Peleg Y, Albeck S, Unger T, Yonath H, Krupkin M, Matzov D, Yonath A.
  Chembiochem. 2015 Jul 6;16(10):1415-9.
  link.
  - Journal cover.
   

• Chapter 6: Glimpse into the origin of life: What was first, the genetic code or its products, the proteins?
  Krupkin M, Bashan A, Yonath A.
  “Why does Evolution Matter? The Importance of Understanding Evolution”, G. Trueba, ed. (Cambridge Scholars Publishing),(2014), p. 87-100.
  link to chapter 6.
  link to book.
  

• Protoribosome by quantum kernel energy method
  Huang L, Krupkin M, Bashan A, Yonath A, Massa L.
  Proc Natl Acad Sci U S A. 2013 Sep 10;110(37):14900-5.
  link.

• A vestige of a prebiotic bonding machine is functioning within the contemporary ribosome
  Krupkin M, Matzov D, Tang H, Metz M, Kalaora R, Belousoff MJ, Zimmerman E, Bashan A, Yonath A.
  Philos Trans R Soc Lond B Biol Sci. 2011 Oct 27;366(1580):2972-8.
  link.
  - Research highlight, “The chemical origins of life and its early evolution: an introduction”, Phil. Trans. R. Soc. B3662853–2856 (2011).
  

• The ribosome as drug target: lessons from 3D structures
  Bashan A, Zimmerman E, Belousoff MJ, Rozenberg H, Davidovich C, Wekselman I, Shapira T, Krupkin M, Yonath A.
  Isr Chem Soc. 2010, 25, 10-18.
  link.
  - Journal cover.
   

• The proto-ribosome : An ancient nano-machine for peptide bond formation
  Davidovich C, Belousoff M, Wekselman I, Shapira T, Krupkin M, Zimmerman E, Bashan A, Yonath A.
  Isr J Chem. 2010 Jun 18;50(1):29-35.
  link.
  - Journal Cover.
   

^* Equal contribution.

Miri Krupkin at pubmed.